Recently, I attempted to use pixi to compile and run podman on FydeOS. While I made some progress, it ultimately only achieved half success. In this blog post, I’ll share the entire process and the issues encountered.

When using pixi to manage bioinformatics analysis environments, we often encounter issues where some Bioconductor R packages show missing dependencies after installation. The exact cause of this problem is currently unclear. After using pixi for a year, this issue still hasn’t been fixed (as of October 2025). This article introduces how to use pixi’s tasks feature to resolve such problems.

I’ve had the Fydetab Duo for over a month, and I’m still trying to find ways to make the most use of this device. At the very least, I’d like to write some blogs during my downtime with it. Hence the following exploration.

Bioinformatics is an interdisciplinary field, and the toolkit or technology stack used in bioinformatics is also quite “interdisciplinary”. The level of fragmentation is, in my opinion, absolutely not less than that of Linux distributions… This also brings us a common challenge: the deployment of bioinformatics analysis environments.